Species
Chondrus crispus
Cyanidiococcus yangmingshanensis
Cyanidioschyzon merolae
Galdieria partita
Galdieria sulphuraria
Gracilaria domingensis
Porphyra umbilicalis
Cyanophora paradoxa CCMP329
Prasinoderma coloniale
Asterochloris glomerata
Astrephomene gubernaculifera
Auxenochlorella protothecoides
Bathycoccus prasinos
Botryococcus braunii
Caulerpa lentillifera
Chlamydomonas eustigma
Chlamydomonas incerta
Chlamydomonas reinhardtii
Chlamydomonas reinhardtii CC-4532C
Chlamydomonas schloesseri
Chlorella sorokiniana
Chlorella variabilis NC64A
Chlorella vulgaris
Chlorokybus atmophyticus-CCAC 0220
Chloropicon primus
Chromochloris zofingiensis
Coccomyxa subellipsoidea
Coelastrum proboscideum
Dunaliella salina
Edaphochlamys debaryana
Gonium pectorale
Micractinium conductrix
Micromonas commoda
Micromonas pusilla
Monoraphidium minutum
Monoraphidium neglectum
Mychonastes homosphaera
Nannochloris desiccata
Ostreococcus lucimarinus
Ostreococcus tauri
Pedinomonas minor
Raphidocelis subcapitata
Tetrabaena socialis
Ulva compressa
Ulva mutabilis
Volvox africanus
Volvox carteri
Volvox reticuliferus NIES-3785
Volvox reticuliferus NIES-3786
Chara braunii
Klebsormidium nitens NIES-2285
Mesostigma viride-CCAC 1140
Mesotaenium endlicherianum
Penium margaritaceum
Spirogloea muscicola
Anthoceros agrestis
Anthoceros angustus
Anthoceros punctatus
Marchantia polymorpha
Calohypnum plumiforme
Ceratodon purpureus
Entodon seductrix
Fontinalis antipyretica
Hypnum curvifolium
Physcomitrium patens
Pohlia nutans
Sphagnum fallax
Sphagnum magellanicum
Isoetes taiwanensis
Selaginella moellendorffii
Adiantum capillus-veneris
Adiantum nelumboides
Alsophila spinulosa
Azolla filiculoides
Ceratopteris richardii
Salvinia cucullata
Abies alba
Cycas panzhihuaensis
Ginkgo biloba
Gnetum montanum
Picea abies
Picea engelmannii
Picea glauca
Pinus tabuliformis
Pinus taeda
Sequoia sempervirens
Sequoiadendron giganteum
Taxus chinensis
Thuja plicata
Welwitschia mirabilis
Amborella trichopoda
Euryale ferox
Nymphaea colorata
Nymphaea thermarum
Aristolochia contorta
Aristolochia fimbriata
Chimonanthus salicifolius
Cinnamomum kanehirae
Liriodendron chinense
Magnolia biondii
Persea americana cv. Hass
Persea americana var. drymifolia
Phoebe bournei
Piper nigrum
Chloranthus sessilifolius
Chloranthus spicatus
Achnatherum splendens
Acorus americanus
Acorus tatarinowii
Aegilops bicornis
Aegilops longissima
Aegilops searsii
Aegilops sharonensis
Aegilops speltoides
Aegilops tauschii
Allium cepa
Allium sativum
Amorphophallus konjac
Ananas comosus
Apostasia shenzhenica
Areca catechu
Asparagus kiusianus
Asparagus officinalis
Asparagus setaceus
Avena atlantica
Avena eriantha
Avena insularis
Avena longiglumis
Avena sativa
Bonia amplexicaulis
Brachypodium distachyon
Brachypodium hybridum
Brachypodium mexicanum
Brachypodium stacei
Brachypodium sylvaticum
Calamus simplicifolius
Carex cristatella
Carex littledalei
Carex scoparia
Cenchrus americanus
Cenchrus purpureus
Chasmanthium laxum
Cleistogenes songorica
Cocos nucifera dwarf
Cocos nucifera tall
Colocasia esculenta
Cremastra appendiculata
Cymbidium ensifolium
Daemonorops jenkinsiana
Dendrobium catenatum
Dendrobium chrysotoxum
Dendrobium huoshanense
Dendrobium nobile
Dendrobium officinale
Dichanthelium oligosanthes
Digitaria exilis
Dioscorea alata
Dioscorea rotundata
Echinochloa colona
Echinochloa crus-galli
Echinochloa haploclada
Echinochloa oryzicola
Elaeis guineensis
Eleusine coracana
Ensete glaucum
Ensete ventricosum
Eragrostis curvula
Eragrostis nindensis
Eragrostis tef
Erianthus fulvus
Gastrodia elata
Guadua angustifolia
Hordeum marinum
Hordeum spontaneum EC_N1
Hordeum spontaneum EC_S1
Hordeum vulgare
Juncus effusus
Juncus inflexus
Lanxangia tsao-ko
Leersia perrieri
Lemna minor
Miscanthus lutarioriparius
Miscanthus sinensis
Musa acuminata
Musa balbisiana
Musa beccarii
Musa itinerans
Musa textilis
Musa troglodytarum
Musa schizocarpa
Olyra latifolia
Oropetium thomaeum
Oryza alta
Oryza barthii
Oryza brachyantha
Oryza glaberrima
Oryza glumaepatula
Oryza granulata
Oryza longistaminata
Oryza meridionalis
Oryza nivara
Oryza punctata
Oryza rufipogon
Oryza sativa subsp. Japonica var. Kitaake
Panicum hallii
Panicum miliaceum
Panicum virgatum
Paspalum vaginatum
Phalaenopsis equestris
Pharus latifolius
Phoenix dactylifera
Phragmites australis
Phyllostachys edulis
Phyllostachys heterocycla
Pistia stratiotes
Puccinellia tenuiflora
Puya raimondii
Raddia distichophylla
Raddia guianensis
Saccharum spontaneum
Saccharum x sp.
Secale cereale
Setaria italica
Setaria viridis
Sorghum bicolor
Spirodela polyrhiza
Sporobolus pyramidalis
Sporobolus stapfianus
Streptochaeta angustifolia
Thinopyrum elongatum
Thinopyrum intermedium
Trichopus zeylanicus
Triticum aestivum
Triticum dicoccoides
Triticum turgidum
Triticum urartu
Urochloa fusca
Vanilla planifolia
Wolffia australiana strain 7733
Wolffia australiana strain 8730
Wurfbainia villosa
Zea mays NKH8431
Zingiber officinale
Zizania latifolia
Zizania palustris
Zostera marina
Zostera muelleri
Zoysia japonica
Zoysia matrella
Zoysia pacifica
Oryza sativa subsp. Japonica
Zea mays B73
Ceratophyllum demersum
Akebia trifoliata
Aquilegia coerulea
Aquilegia oxysepala
Buxus austroyunnanensis
Buxus sinica
Coptis chinensis
Corydalis tomentella
Epimedium pubescens
Kingdonia uniflora
Macadamia integrifolia
Macleaya cordata
Nelumbo Adans cv. Taikonglian No. 3
Nelumbo nucifera var. China Antique
Papaver rhoeas
Papaver setigerum
Papaver somniferum
Telopea speciosissima
Tetracentron sinense
Thalictrum thalictroides
Trochodendron aralioides
Abrus precatorius
Acacia pycnantha
Acer catalpifolium
Acer negundo
Acer pseudosieboldianum
Acer saccharum
Acer truncatum
Acer yangbiense
Actinidia chinensis
Actinidia eriantha
Aegiceras corniculatum
Aeschynomene evenia
Aethionema arabicum
Aldrovanda vesiculosa
Alyssum linifolium
Amaranthus hybridus
Amaranthus hypochondriacus
Amaranthus palmeri
Ammopiptanthus nanus
Amphicarpaea edgeworthii
Anacardium occidentale
Andrographis paniculata
Angelica sinensis
Antirrhinum majus
Apium graveolens
Aquilaria sinensis
Arabidopsis halleri
Arabidopsis lyrata
Arabidopsis suecica
Arabidopsis thaliana
Arabis alpina
Arachis duranensis
Arachis hypogaea
Arachis ipaensis
Arachis monticola
Aralia elata
Arctium lappa
Artemisia annua
Artocarpus altilis
Artocarpus heterophyllus
Artocarpus nanchuanensis
Atalantia buxifolia
Atriplex hortensis
Averrhoa carambola
Avicennia marina
Azadirachta indica
Bauhinia variegata
Begonia darthvaderiana
Begonia fuchsioides
Begonia loranthoides
Begonia masoniana
Begonia peltatifolia
Benincasa hispida
Beta patula
Beta vulgaris
Betula pendula
Betula platyphylla
Boea hygrometrica
Boechera stricta
Boehmeria nivea cv. Zhongsizhu 1
Boehmeria nivea var. tenacissima cv. Qingyezhuma
Bombax ceiba
Brassica carinata
Brassica juncea
Brassica napus
Brassica nigra
Brassica oleracea
Brassica rapa
Bretschneidera sinensis
Bruguiera sexangula
Buddleja alternifolia
Cajanus cajan
Cakile maritima
Callicarpa americana
Calotropis gigantea
Camelina neglecta
Camelina sativa
Camellia chekiangoleosa
Camellia lanceoleosa
Camellia sinensis cv. DuyunMaojian
Camellia sinensis var. assamica
Camptotheca acuminata
Cannabis sativa
Capparis spinosa
Capsella grandiflora
Capsella rubella
Capsicum annuum
Capsicum baccatum
Capsicum chinense
Cardamine enshiensis
Cardamine hirsuta
Cardiospermum halicacabum
Carica papaya
Carpinus fangiana
Carpinus viminea
Carthamus tinctorius
Carya cathayensis
Carya illinoinensis
Castanea crenata
Castanea mollissima cv. Hei-Shan-Zhai-7
Castanea mollissima cv. N11-1
Castanea mollissima cv. Yan-Hong
Castanea mollissima cv. Yan-Shan-Zao-Sheng
Castanopsis tibetana
Casuarina equisetifolia
Casuarina glauca
Catharanthus roseus
Caulanthus amplexicaulis
Cephalotus follicularis
Cerasus x kanzakura var. Atami-zakura
Cerasus x kanzakura var. Kawazu-zakura
Cerasus x yedoensis var. nudiflora
Cerasus x yedoensis var. Somei-Yoshino
Cercis canadensis
Cercis chinensis
Chamaecrista fasciculata
Chenopodium formosanum
Chenopodium pallidicaule
Chenopodium quinoa
Chiococca alba
Chrysanthemum nankingense
Chrysanthemum seticuspe
Cicer arietinum
Cicer echinospermum
Cicer reticulatum
Cichorium endivia
Cichorium intybus
Citrullus lanatus
Citrus clementina
Citrus grandis
Citrus ichangensis
Citrus medica
Citrus reticulata
Citrus sinensis
Citrus unshiu
Cleome violacea
Coffea arabica
Coffea canephora
Coffea humblotiana
Conyza canadensis
Corchorus capsularis
Corchorus olitorius
Coriandrum sativum
Corylus avellana
Corylus heterophylla
Corylus mandshurica
Corymbia citriodora
Crambe hispanica
Crataegus pinnatifida
Cucumis hystrix
Cucumis melo
Cucumis sativus
Cucumis x hytivus
Cucurbita argyrosperma
Cucurbita maxima
Cucurbita moschata
Cucurbita pepo
Cuscuta australis
Cuscuta campestris
Cyclocarya paliurus
Cynara cardunculus
Dalbergia odorifera
Datura stramonium
Daucus carota
Davidia involucrata
Descurainia sophioides
Dianthus caryophyllus
Dimocarpus longan
Diospyros lotus
Diospyros oleifera
Dipterocarpus turbinatus
Diptychocarpus strictus
Boea hygrometrica
Drosera spatulata
Dryas drummondii
Durio zibethinus
Elaeagnus angustifolia
Entada phaseoloides
Erigeron breviscapus
Erigeron canadensis
Eriobotrya japonica
Eruca vesicaria
Erysimum cheiranthoides
Erythranthe guttata
Eucalyptus grandis
Euclidium syriacum
Euphorbia lathyris
Euscaphis japonica
Eustoma grandiflorum
Eutrema salsugineum
Fagopyrum esculentum
Fagopyrum tataricum
Fagus sylvatica
Faidherbia albida
Ficus carica
Ficus erecta
Ficus hispida
Ficus microcarpa
Fortunella hindsii
Fragaria daltoniana
Fragaria iinumae
Fragaria mandshurica
Fragaria nilgerrensis
Fragaria pentaphylla
Fragaria vesca
Fragaria viridis
Fragaria x ananassa
Fragaria orientalis
Fraxinus excelsior
Fraxinus pennsylvanica
Gardenia jasminoides
Gelsemium elegans
Genlisea aurea
Gilia yorkii
Gillenia trifoliata
Glycine cyrtoloba
Glycine dolichocarpa
Glycine falcata
Glycine max
Glycine soja
Glycine stenophita
Glycine syndetika
Glycine tomentella sp.D3
Gossypioides kirkii
Gossypium anomalum
Gossypium arboreum
Gossypium aridum
Gossypium armourianum
Gossypium australe
Gossypium barbadense
Gossypium bickii
Gossypium darwinii
Gossypium davidsonii
Gossypium gossypioides
Gossypium harknessii
Gossypium herbaceum
Gossypium hirsutum
Gossypium klotzschianum
Gossypium laxum
Gossypium lobatum
Gossypium longicalyx
Gossypium mustelinum
Gossypium raimondii
Gossypium rotundifolium
Gossypium schwendimanii
Gossypium stocksii
Gossypium thurberi
Gossypium tomentosum
Gossypium trilobum
Gossypium turneri
Gypsophila paniculata
Haloxylon ammodendron
Hamamelis virginiana
Handroanthus impetiginosus
Helianthus annuus
Hevea brasiliensis
Hibiscus cannabinus
Hippophae rhamnoides
Hirschfeldia incana
Hopea hainanensis
Humulus lupulus
Hydrangea macrophylla
Hydrangea quercifolia
Iberis amara
Ilex polyneura
Iochroma cyaneum
Ipomoea aquatica
Ipomoea cairica
Ipomoea nil
Ipomoea trifida
Ipomoea triloba
Isatis tinctoria
Jacaranda mimosifolia
Jasminum sambac cv. bifoliatum
Jasminum sambac cv. unifoliatum
Jatropha curcas
Juglans mandshurica
Juglans regia
Juglans sigillata
Kalanchoe fedtschenkoi
Kalanchoe laxiflora
Kandelia obovata
Lablab purpureus
Lactuca sativa
Lagenaria siceraria
Leavenworthia alabamica
Lepidium meyenii
Lepidium sativum
Lindenbergia philippensis
Linum usitatissimum
Litchi chinensis
Lithospermum erythrorhizon
Lobularia maritima
Lonicera japonica
Lotus japonicus
Luffa cylindrica
Lunaria annua
Lupinus albus
Lupinus angustifolius
Macrotyloma uniflorum
Malania oleifera
Malcolmia maritima
Malus baccata
Malus domestica
Malus prunifolia
Malus sieversii
Malus sylvestris
Mangifera indica
Manihot esculenta
Medicago polymorpha
Medicago sativa
Medicago truncatula
Megacarpaea delavayi
Megadenia pygmaea
Melastoma dodecandrum
Melilotus albus
Microthlaspi erraticum
Mikania micrantha
Mimulus guttatus
Moringa oleifera
Morus notabilis
Mucuna pruriens
Myagrum perfoliatum
Myrica rubra
Neolamarckia cadamba
Nephelium lappaceum
Nicotiana attenuata
Nicotiana benthamiana
Nicotiana tabacum
Nicotiana tomentosiformis
Nissolia schottii
Nymphoides indica
Nyssa sinensis
Nyssa yunnanensis
Ocimum basilicum
Olea europaea
Ophiorrhiza pumila
Origanum majorana
Origanum vulgare
Orychophragmus violaceus
Paeonia ostii
Paeonia suffruticosa
Panax ginseng
Panax japonicus
Panax quinquefolius
Panax stipuleanatus
Parasponia andersonii
Passiflora edulis
Passiflora organensis
Paulownia fortunei
Perilla citriodora PC02
Perilla citriodora PC99
Perilla frutescens
Petunia axillaris
Petunia inflata
Phaseolus acutifolius
Phaseolus lunatus
Phaseolus vulgaris
Phtheirospermum japonicum
Physalis floridana
Physalis grisea
Physalis pruinosa
Physalis pubescens
Picrorhiza kurrooa
Pistacia vera cv. Bagyolu
Pistacia vera
Pistacia vera cv. Siirt
Pisum sativum
Pogostemon cablin
Poncirus trifoliata
Populus alba
Populus alba x Populus tremula
Populus deltoides
Populus euphratica
Populus ilicifolia
Populus maximowiczii
Populus pruinosa
Populus simonii
Populus tomentosa
Populus tremula
Populus tremuloides
Populus trichocarpa
Populus wilsonii
Portulaca amilis
Potentilla micrantha
Primula veris
Prunus armeniaca cv. Stella
Prunus armeniaca Marouch n14
Prunus avium
Prunus domestica
Prunus dulcis
Prunus mandshurica
Prunus mume
Prunus persica
Prunus salicina
Prunus sibirica
Punica granatum
Pyrus betulifolia
Pyrus bretschneideri cv. Dangshansuli
Pyrus bretschneideri cv. Hongxiangsu
Pyrus communis
Pyrus pyrifolia cv. Cuiguan
Pyrus pyrifolia var. Nijisseiki
Pyrus ussuriensis x communis
Quercus acutissima
Quercus gilva
Quercus lobata
Quercus mongolica
Quercus robur
Quercus rubra
Quercus suber
Raphanus raphanistrum
Raphanus sativus
Rhodiola crenulata
Rhododendron delavayi
Rhododendron griersonianum
Rhododendron henanense
Rhododendron ovatum
Rhododendron ripense
Rhododendron simsii
Rhododendron williamsianum
Ricinus communis
Rorippa islandica
Rosa chinensis
Rosa multiflora
Rosa rugosa
Rosa wichuraiana
Rosmarinus officinalis
Rubus chingii
Rubus corchorifolius
Rubus occidentalis
Salix arbutifolia
Salix brachista
Salix chaenomeloides
Salix dunnii
Salix purpurea
Salix suchowensis
Salvia bowleyana
Salvia miltiorrhiza
Salvia splendens
Sapindus mukorossi
Sapria himalayana
Scalesia atractyloides
Schrenkiella parvula
Sclerocarya birrea
Scutellaria baicalensis
Scutellaria barbata
Sechium edule
Selenicereus undatus
Senna tora
Sesamum indicum
Simmondsia chinensis
Sinapis alba
Sinapis arvensis
Sindora glabra
Siraitia grosvenorii
Sisymbrium irio
Smallanthus sonchifolius
Solanum aethiopicum
Solanum candolleanum
Solanum chacoense M6
Solanum chilense
Solanum lycopersicoides
Solanum lycopersicum
Solanum melongena
Solanum pennellii
Solanum pimpinellifolium
Solanum stenotomum
Solanum tuberosum
Solanum verrucosum
Sonneratia alba
Sonneratia caseolaris
Sorbus pohuashanensis
Spatholobus suberectus
Speranskia yunnanensis
Spinacia oleracea
Stanleya pinnata
Stellera chamaejasme
Stevia rebaudiana
Streptocarpus rexii
Striga asiatica
Strobilanthes cusia
Suaeda aralocaspica
Suaeda glauca
Syringa oblata
Syzygium aromaticum
Syzygium grande
Taraxacum kok-saghyz
Taraxacum mongolicum
Tarenaya hassleriana
Tectona grandis
Tetrastigma voinierianum
Thellungiella halophila
Theobroma cacao
Thlaspi arvense
Thymus quinquecostatus
Toona ciliata
Toona sinensis
Trema orientalis
Trifolium pratense
Trifolium subterraneum
Tripterygium wilfordii
Utricularia reniformis
Vaccinium corymbosum
Vaccinium darrowii
Vaccinium macrocarpon
Vaccinium oxycoccos
Vernicia fordii
Vicia sativa
Vigna angularis
Vigna exilis
Vigna indica
Vigna marina
Vigna minima
Vigna mungo
Vigna radiata
Vigna riukiuensis
Vigna stipulacea
Vigna subterranea
Vigna trilobata
Vigna umbellata
Vigna unguiculata
Vigna vexillata
Vitellaria paradoxa
Vitis arizonica
Vitis riparia
Vitis rotundifolia
Vitis vinifera
Xanthoceras sorbifolium
Zanthoxylum armatum
Zanthoxylum bungeanum
Ziziphus jujuba
Herpetospermum pedunculosum
Melastoma candidum
Euphorbia peplus
Quercus dentata
Amaranthus tricolor
Gynandropsis gynandra
Vicia faba cv. Hedin/2
Vicia faba cv. Tiffany
Prunus campanulata
Arabidopsis thaliana Shoot_apex
Arabidopsis thaliana Meristem
Gene
ACR4
AG
AGL22
AGO1
AGO10
AHK2
AHK4
AHP6
AMP1
AP2
APL
APP1
AQC1
ARF10
ARF16
ARF19
ARF3
ARF4
ARF5
ARF7
ARR1
ARR10
ARR12
ARR15
ARR7
AS1
AS2
AtCDC5
AtCKX5
AtCKX6
ATHB8
AtLA1
AtMC4
AtMMS21
AtRING1a
AtRING1b
BAM1
BARD1
BEH3
BELLRINGER
BES1
BIB
BOP1
BOP2
BRI1
BRL1
BRL3
BRM
BRU1
CDF4
CDKB1;1
CDKB1;2
CHR12
CHR23
CIK1
CIK2
CIK3
CIK4
CIK5
CIK6
CLE1
CLE17
CLE19
CLE2
CLE3
CLE4
CLE40
CLE41
CLE44
CLE5
CLE6
CLE7
CLF
CLV1
CLV2
CLV3
CNA
COI1
COP1
CRN
CUC1
CUC2
CUC3
CYCD1;1
CYCD3;3
CYCD6;1
CYP78A5
CYP78A7
DRN
E2Fa
EIL2
EIL3
EIN3
EMB1611
ER
ERF109
ERF114
ERF115
ERL1
ERL2
FAF1
FAF2
FAF3
FAF4
FAS1
FAS2
FEZ
FIL
GCN5
GIF1
GIF2
GIF3
GSO1
GSO2
HAM1
HAM2
HAM3
HAM4
HAN
HCA2
HDA19
HDA9
HEC1
HEC2
HEC3
IAA17
IPT1
IPT3
IPT5
IPT7
JKD
JLO
KNAT1
KNAT2
KNAT6
KNU
KRP2
LBD16
LFY
LHP1
LOG4
LOG7
MDF
MOL1
MYB115
MYB3R1
MYB3R4
MYC2
OBE1
OBE2
OBE3
PAN
PGA37
PHB
PHB3
PHV
PID
PIN1
PIN3
PIN7
PLL1
PLT1
PLT2
PLT3
PNF
POL
PRL1
PRMT5
PSK5
PXC1
PXY
RAX1
RBR
RCN1
REV
RGF1
RGF2
RGF3
RopGEF7
RPK1
RUL1
SCL28
SCR
SCZ
SDG4
SEU
SHR
SHY2
SKIP
SMB
SMOS1
SOG1
SPT
STIP
STM
SUPERMAN
SYD
TCP20
TCP21
TCP3
TGA2
TGA5
TGA6
TOAD2
TOR
TSL
ULT1
WOX11
WOX12
WOX14
WOX3
WOX4
WOX5
WRKY23
WUS
YAB3
YAB5
YAK1
YUC1
YUC2
YUC4
YUC6
Blast E-value:
1e-5
1e-6
1e-7
1e-8
1e-9
1e-10
1e-20
Hierarchical clustering on the left
Yes
No
Hierarchical clustering at the top
Yes
No
Log transformation(log10(x+1))
Yes
No